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Base-based Modification Service

Commonly Used Methods for Base Modification

Base-based modification of nucleosides and nucleotides can be achieved by introducing different chemical groups into the molecular structure of the nucleoside or nucleotide by utilizing organic synthesis. For example, different functional groups are introduced at specific positions by chemical reactions such as esterification, substitution, and oxidation reactions. Another approach is by introducing a specific chemical functional group on a starting molecule and then converting it to the target modifying group using a chemical reaction. For example, by introducing an acetone or allylacetone functional group, it can be converted to an amino group or a hydroxyl group after a selective chemical reaction. By modification, the properties such as solubility, stability, and affinity can be changed, thus improving the efficacy and bioavailability of drugs. In addition, modified nucleosides and nucleotides can be used for labeling molecules, probe design, and biosensors, providing a powerful tool and platform for scientific research.

Key Technologies

The key technologies of this service are organic synthesis-based modification methods, specifically halogenation, N-conjugation, and azotation, which utilize chemical reactions such as esterification, substitution, and oxidation to introduce functional groups at specific positions on nucleosides and nucleotides, thereby altering their properties for enhanced stability, solubility, and affinity.

Sugar-Shielded Bases, Therapy-Ready Sequences.

CD BioGlyco is a leading company providing specialized nucleoside & nucleotide Modification services. With innovation and excellence in mind, we are committed to providing high-quality, customized modification solutions to our clients. Our modification services include halogenation, N-conjugation, and azotation.

Workflow

  • Project Design

The process begins with a detailed discussion of your project requirements. Our team of specialists will analyze your specific needs, review the target molecular structure, and develop a tailored modification plan.

  • Sample and Material Provision

Clients provide the necessary nucleic acid samples, ensuring they meet the required purity and concentration standards for the modification reaction.

  • Chemical Synthesis and Modification

Our expert chemists execute the base modification using advanced techniques, such as the palladium-catalyzed N-arylation method or other proprietary chemistries, to introduce the desired functional group onto the nucleobase.

  • Purification and Quality Control

The modified products undergo rigorous purification processes to remove unreacted starting materials and by-products. Each batch is then subjected to a comprehensive suite of quality control tests, including mass spectrometry and HPLC, to confirm identity, purity, and integrity.

  • Final Delivery and Support

The purified, high-quality modified nucleosides or nucleotides are delivered to you with a detailed report, including all relevant data. Our scientific support team remains available for any post-delivery questions or assistance.

Our workflow. (CD BioGlyco)

Publication Data

DOI.: 10.3389/fchem.2022.1051525

Journal: Frontiers in Chemistry

IF: 4.2

Published: 2022

Results: This expansive critique interrogates nucleobase-modified nucleotides—synthetic analogues harboring altered nucleobases devoid of classical hydrogen-bonding functionalities—and their paradigm-shifting implementations across biochemistry, synthetic biology, and therapeutics. The authors methodically assess how such analogues subvert entrenched doctrines of DNA replication fidelity, establishing hydrogen bonding's nonessentiality for polymerase catalysis. Rather, geometric congruence, hydrophobic forces, and π-orbital stacking dictate enzymatic assimilation. The treatise spotlights three pivotal domains: (1) mechanistic revelations concerning polymerase function via analogue deployment as molecular probes; (2) synthetic biology breakthroughs encompassing genetic alphabet expansion through engineered base dyads (exempli gratia Ds:Px) and evolved polymerases accommodating unnatural nucleotides; and (3) therapeutic promise epitomized by nucleoside variants like 5-NIdR, which potentiate temozolomide's anticancer synergism through translesion DNA synthesis inhibition. These innovations crystallize nucleobase modifications' protean utility in reconfiguring genetic engineering, pharmacotherapeutic discovery, and oncological intervention.

Applications

  • Modifications to nucleotides help researchers gain insight into the structure and function of DNA and RNA.
  • Nucleotide modification is an essential medicinal chemistry tool that can significantly enhance the stability and selectivity of drugs by altering the structure of nucleotide molecules.
  • Nucleotide modifications can improve efficacy and reduce side effects, for example, by altering the steric configuration of a drug molecule and increasing its match to the receptor structure, thereby enhancing the affinity of the drug.

Advantages of Us

  • With a focus on compliance and innovation, we are committed to providing our clients with a more satisfying service experience through innovation and technological advancements.
  • Our experts have extensive experience and expertise in the fields of organic chemical synthesis, multi-step synthesis, and catalytic reactions.
  • We have invested significant resources and R&D efforts in synthetic technologies.

Frequently Asked Questions

Associated Services

Our base modification services enable precise alterations—such as halogenation, methylation, or bioorthogonal tagging—to optimize stability, binding affinity, and therapeutic functionality of nucleic acid building blocks. To expand these capabilities into de novo molecular construction, we offer integrated Nucleoside & Nucleotide Synthesis Services, covering:

CD BioGlyco provides base-based nucleoside & nucleotide modification services based on our leading platform and expertise. Our efficient workflow and strict quality management system ensure the on-time delivery of projects and help our clients achieve success in drug discovery, bioscience research, and other fields. If you need base-based services, please feel free to contact us for more detailed information.

Reference

  1. Berdis, A. Nucleobase-modified nucleosides and nucleotides: applications in biochemistry, synthetic biology, and drug discovery. Frontiers in Chemistry. 2022, 10: 1051525. (Open Access)
This service is for Research Use Only, not intended for any clinical use.
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CD BioGlyco is a world-class biotechnology company with offices in many countries. Our products and services provide a viable option to what is otherwise available.

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